Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015884091.1_cds_XP_016438714.1_34352
CDS Infomation

[gene=LOC107764622] [db_xref=GeneID:107764622] [protein=protease HtpX homolog] [protein_id=XP_016438714.1] [location=join(3768..3989,4132..4189,4925..4992,5581..5760,6148..6244,6714..6823,6922..7055,7160..7289)] [gbkey=CDS]
Sequence

ATGGCTTCCGTTCCTCTTCCTATGGCAGTGGCACCACTAAATTTGTCATCTCTTTTCATT
AACTCTTCCTCTAACAATCCTCCAATCAGTTCACTTTGCACTGTTGGATTTAAGCAGCTG
GAGACGAATCCAAAAAGGTTGAGGTCATTTGTGCGTCGAGCTGCTTCAGTAACTTTTCGT
GATTTGGACGCCGATGATTTTAGACATCCTCTTGACAGACAGAATACGTTGCTTTTGAGA
GCCATACCTGGTCTCAACGACATTGGAAAAGCCTTACTTGGGAGTGTTTCGGAGCAAGTT
ATGCTTCTGGAGAACATAGGAACATCAGTTCTTGTTTCTGAAAATCAGCTCCCTGAACTT
CATCGCTTAATGGTTGAGGCTGCTAGAATACTCAATATTGAGGCTCCTGACTTATATGTA
CGTCAAAGTCCTGTACCCAATGCATATACTCTGGCTGTCAGTGGTAAAAAGCCTTTTGTA
GTTATTCATACAAGCCTTGTGGAGCTGCTGAGTCGAAAGGAATTGCAGGCAGTCTTGGCT
CATGAGTTAGGTCATCTCAAATGTGATCATGGTTTGTGGTTGACATTTGCAAATATTCTC
ACTCTCGGTGCCTATACTGTTCCTGGTATTGGTGGTTTGATTGCTCAGAGGCTGGAAGAA
CAGCTCTTCCGCTGGCTTCGAGCAGCAGAACTCACTTGTGATCGTGCAGCACTTCTTGTT
GCTCAAGATCCAAAGGTGGTCGTTTCAGTACTAATGAAATTAGCTGGCGGCTGTCCATCT
CTGTCGGATCAACTGAATGTGGATGCATTCTTAGAGCAAGCTCGCTCTTATGACAAAGCA
TCTTCAAGCCCAGTTGGGTGGTATATTAGAAATGCTCAAACAAGGCAACTTTCACATCCA
CTCCCCGTTTTACGTGCACGCGAGATTGATGAATGGTCGAGAAGTCAAGAGTATAGGTCT
CTTCTTAAGCGTGCAATACAGACTGTGCAAAATCTTTAG

Peptide Sequence

PEP ID

XP_016438714.1
PEP Infomation

PREDICTED: protease HtpX homolog [Nicotiana tabacum]
Sequence

MASVPLPMAVAPLNLSSLFINSSSNNPPISSLCTVGFKQLETNPKRLRSFVRRAASVTFR
DLDADDFRHPLDRQNTLLLRAIPGLNDIGKALLGSVSEQVMLLENIGTSVLVSENQLPEL
HRLMVEAARILNIEAPDLYVRQSPVPNAYTLAVSGKKPFVVIHTSLVELLSRKELQAVLA
HELGHLKCDHGLWLTFANILTLGAYTVPGIGGLIAQRLEEQLFRWLRAAELTCDRAALLV
AQDPKVVVSVLMKLAGGCPSLSDQLNVDAFLEQARSYDKASSSPVGWYIRNAQTRQLSHP
LPVLRAREIDEWSRSQEYRSLLKRAIQTVQNL

Transcript Sequence

Gene sequence data has not been registered.